Preserving Derivative Information while Transforming Neuronal Curves¶
Manuscript¶
Athey, T. L., Tward, D. J., Mueller, U., Younes, L., Vogelstein, J. T., & Miller, M. I. (2023). Preserving Derivative Information while Transforming Neuronal Curves. arXiv:2303.09649.
Neuron Mapping¶
First, make sure that you have installed the
brainlit
package [Documentation].Second, uncompress the data
brainlit/experiments/map_neurons/data/mapping-files.zip
.Then, you can run the notebook that generates figures:
brainlit/experiments/map_neurons/map_neurons.ipynb
The files in the
other
are more for scratch work, and are unlikely to be useful to new users.
Poster¶
Athey, T. L., Vogelstein, J. T., & Miller, M. I. (2022). Nyquist Sampling Rate for Projection Neuron Reconstruction. Poster at Society for Neuroscience Meeting.
Relevant directory¶
brainlit/experiemnts/map_neurons
Nyquist Sampling Rate for Projection Neuron Reconstruction¶
First, make sure that you have installed the
brainlit
package [Documentation].Results are in the notebook:
brainlit/experiments/map_neurons/sampling.ipynb